PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01246.1.p
Common NameLOC105955115, MIMGU_mgv1a009487mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 341aa    MW: 37732.5 Da    PI: 5.8583
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01246.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.5e-30133193259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       dDgy+WrKYGqK++ g+++prsYYrCt++   +C ++k+v+rs+edp+++e+tY+g H+++
  Migut.E01246.1.p 133 DDGYSWRKYGQKDILGAKHPRSYYRCTYRlaqNCFATKQVQRSDEDPTIFEVTYKGAHTCN 193
                       8***************************9999***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.217127195IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.9E-30129194IPR003657WRKY domain
SuperFamilySSF1182907.85E-27131194IPR003657WRKY domain
SMARTSM007741.0E-40132194IPR003657WRKY domain
PfamPF031062.5E-27133192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MESGNFSWEY ETLINELTQG MEKAKLLQFH LCSTTSPSRT QHLLLQRILS SYEKSLSILN  60
WRGGQLAAPP PPTSGGAPES SISVDGSPTS EDLNKNFGDR NKDYTTSKKR KIQPTWTEQV  120
RVNPENGLEG PTDDGYSWRK YGQKDILGAK HPRSYYRCTY RLAQNCFATK QVQRSDEDPT  180
IFEVTYKGAH TCNQSSPAAN PAAPPPPASP ENQELNKHNP HNNNNQTLIN LKANLRVTTE  240
NTPPQFSFQS ENYYLPISGF AGENHLCQYS PQFLSPSASE TNYFSPANYG STNFGGNDIA  300
DIISVHASTT NSPIGGMEFP FDPVDLDPIF PFNNASGFFT *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834267.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A022RJV80.0A0A022RJV8_ERYGU; Uncharacterized protein
STRINGPGSC0003DMT4000149491e-108(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-55WRKY family protein